Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890465.1_cds_XP_016445171.1_40155
CDS Infomation

[gene=LOC107770381] [db_xref=GeneID:107770381] [protein=GDSL esterase/lipase 2-like] [protein_id=XP_016445171.1] [location=complement(join(15625..15866,16600..16864,16985..17191,18076..18218,18672..18778,23779..24314))] [gbkey=CDS]
Sequence

ATGGTGAACAAGGTCCTGCTCCTAAGCGCAAAGAGGCATTACATTACTTCAAAAGCATAC
TTGTTCCTCATGGAAGCACTGGATGCATACACTACCATCAACATGCCTGGTATCATGATT
GAACATATGAAAAAGGTGGCAGACTTCAAGGAAGGGAACCATGGTTTGCCTTATGGGTTC
TTGCTCACTAGAGTGTTTGAATACTTCAAAGTCCCTTTGGGAAGATTAGCAGTGGGAACG
CAAAAGCAGATCTTCTTAATGACAACCTTAGAGGAATGCGAGTATATAGACAAGAAGGGG
GGTGTTGGCAGCAATTCTACTATTTCTCAGTTAATTGATACTCAGACTACTGCTAACGAG
GAAATAAGGAGGATGGAGACTAGGAATGCCATTCTTGAGCGACAGCTCAGTCAAGCCAAA
GAGGAACCTGGTTCTACCAGTGAAAAGGGTGTAGAGGTTGCTCGCTTGACTGCTGAAAAT
GCAGACCTGAGGAAACAGGTTAAGGACCTGAAAGAGCAGCTGATAAACGAGCAACGCTAT
GAAAGATCAGCCCTCTTTGTATTTGGTGATTCCCTATTTGATCCTGGGAATAACAATTAT
ATAAATACCACTACTCAATTCCAAGCTAATTGGTGGCCTTATGAATTCGTTGTATTGTTT
TTAGCCGAATATGCAGAGTTGCCACTCATTCCATCGTATTTTGAGATTGGCAAAGATGGA
TCTATCCATGGAGTGAATTTCGCATCAGGTGGAGCTGGCTGTTTAAAAGAAACTTTTCGT
GGCTTTGTTATAGACCTTAAAACACAATTGAAATACTTCAAAAAAGTGGCTAAAGATTTG
AAGAAGTTTGGAGCAAAAAAGTCCAAACAACTCCTCTCCAATGCTGTATACATATTTAGC
GCTGGAAATAATGATTACTTTGAATTTCCTGTGACATATTCCAAGGAAGAATATGTAAAG
ATGGTAGTGGGAAATTTGACATCTGTTTTGAAGGGAATATACAAGAAAGGAGGGAGAAAA
TTTGCCATTCTTAGTTTGGCTCCTTTGGGTTGTACACCAGGTTCTAGGGCTCTTAATTTC
CAACAAGGAAATAAAAGTGGCAACTGCCTAGAAGAACTGACAAACCTTGCAAAATTACAC
AATTCAGCTTTGCCTAAAATGCTAAAGCAACTAGAGGATAAATTACCTGGATTTAAGTAT
TCCTTGTTTGATTTCTTCAAAGTTGCTATTGAAATAATTGACAACCCTTCAAAATATGGT
TTTAAAACATCTAAAAGTGCTTGTTGTGGGACGGGTCCATTCAGAGGAATTTATAGTTGT
GGAGGCAAGAGACAAGTAAAAGAGTACAAGTTGTGCAAAAAAGTGAAGGATTATATGTTT
TTTGACTCTGGTCATCTTACAGAAGTGGCATACAAACAAGTTGCTGAATTACTATGGAAT
GGAACTGTCGATGTTGTTGAGCCTTACAATTTAAAGTCATTTTTCGATCTTTCAACATAG

Peptide Sequence

PEP ID

XP_016445171.1
PEP Infomation

PREDICTED: GDSL esterase/lipase 2-like [Nicotiana tabacum]
Sequence

MVNKVLLLSAKRHYITSKAYLFLMEALDAYTTINMPGIMIEHMKKVADFKEGNHGLPYGF
LLTRVFEYFKVPLGRLAVGTQKQIFLMTTLEECEYIDKKGGVGSNSTISQLIDTQTTANE
EIRRMETRNAILERQLSQAKEEPGSTSEKGVEVARLTAENADLRKQVKDLKEQLINEQRY
ERSALFVFGDSLFDPGNNNYINTTTQFQANWWPYEFVVLFLAEYAELPLIPSYFEIGKDG
SIHGVNFASGGAGCLKETFRGFVIDLKTQLKYFKKVAKDLKKFGAKKSKQLLSNAVYIFS
AGNNDYFEFPVTYSKEEYVKMVVGNLTSVLKGIYKKGGRKFAILSLAPLGCTPGSRALNF
QQGNKSGNCLEELTNLAKLHNSALPKMLKQLEDKLPGFKYSLFDFFKVAIEIIDNPSKYG
FKTSKSACCGTGPFRGIYSCGGKRQVKEYKLCKKVKDYMFFDSGHLTEVAYKQVAELLWN
GTVDVVEPYNLKSFFDLST

Transcript Sequence

Gene sequence data has not been registered.